--- a/admin/naa-agift-tree.php
+++ b/admin/naa-agift-tree.php
@@ -31,9 +31,9 @@
 <div id="tree-container"></div>
  <div id="viz"></div>
 
-<script type="text/javascript" src="../javascripts/jquery-1.6.2.min.js"></script>
-<script type="text/javascript" src="../javascripts/d3.min.js"></script>
-<script type="text/javascript" src="../javascripts/d3.layout.min.js"></script>
+<script type="text/javascript" src="../js/jquery-1.6.2.min.js"></script>
+<script type="text/javascript" src="../js/d3.min.js"></script>
+<script type="text/javascript" src="../js/d3.layout.min.js"></script>
 
 <script>
     /**

--- a/bubbletree.php
+++ b/bubbletree.php
@@ -5,13 +5,13 @@
         <meta charset="UTF-8"/> 
         <title>Minimal BubbleTree Demo</title> 
         <script type="text/javascript" src="http://code.jquery.com/jquery-1.7.2.js"></script> 
-        <script type="text/javascript" src="javascripts/bubbletree/lib/jquery.history.js"></script> 
-        <script type="text/javascript" src="javascripts/bubbletree/lib/raphael.js"></script> 
-        <script type="text/javascript" src="javascripts/bubbletree/lib/vis4.js"></script> 
-        <script type="text/javascript" src="javascripts/bubbletree/lib/Tween.js"></script> 
-        <script type="text/javascript" src="javascripts/bubbletree/build/bubbletree.js"></script> 
-        <link rel="stylesheet" type="text/css" href="javascripts/bubbletree/build/bubbletree.css" /> 
-        <script type="text/javascript" src="javascripts/bubbletree/styles/cofog.js"></script> 
+        <script type="text/javascript" src="js/bubbletree/lib/jquery.history.js"></script> 
+        <script type="text/javascript" src="js/bubbletree/lib/raphael.js"></script> 
+        <script type="text/javascript" src="js/bubbletree/lib/vis4.js"></script> 
+        <script type="text/javascript" src="js/bubbletree/lib/Tween.js"></script> 
+        <script type="text/javascript" src="js/bubbletree/build/bubbletree.js"></script> 
+        <link rel="stylesheet" type="text/css" href="js/bubbletree/build/bubbletree.css" /> 
+        <script type="text/javascript" src="js/bubbletree/styles/cofog.js"></script> 
 
 
         <script type="text/javascript"> 

--- a/graph.php
+++ b/graph.php
@@ -86,9 +86,9 @@
 if ($format == "html") {
     ?>
  <div id="sigma-example" width="960" style="min-height:800px;background-color: #333;"></div>
-  <script src="javascripts/sigma.min.js"></script>
-  <script src="javascripts/sigma/plugins/sigma.parseGexf.js"></script>
-  <script src="javascripts/sigma/plugins/sigma.forceatlas2.js"></script>
+  <script src="js/sigma.min.js"></script>
+  <script src="js/sigma/plugins/sigma.parseGexf.js"></script>
+  <script src="js/sigma/plugins/sigma.forceatlas2.js"></script>
   <script type="text/javascript">function init() {
   // Instanciate sigma.js and customize rendering :
   var sigInst = sigma.init(document.getElementById('sigma-example')).drawingProperties({

--- a/include/template.inc.php
+++ b/include/template.inc.php
@@ -66,11 +66,11 @@
 
 
             <!-- Included JS Files -->
-            <script src="<?php echo $basePath; ?>javascripts/foundation.js"></script>
-            <script src="<?php echo $basePath; ?>javascripts/app.js"></script>
+            <script src="<?php echo $basePath; ?>js/foundation.js"></script>
+            <script src="<?php echo $basePath; ?>js/app.js"></script>
            <script src="http://code.jquery.com/jquery-1.7.1.min.js"></script>
             
-    <script type="text/javascript" src="javascripts/flotr2/flotr2.js"></script>
+    <script type="text/javascript" src="<?php echo $basePath ?>js/flotr2/flotr2.js"></script>
         <?php
         if (strpos($_SERVER['SERVER_NAME'], ".gs")) {
             ?>